Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YTHDC1YTH domain containing 1. (685 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
   
0.979
PAPOLG
Poly(A) polymerase gamma.
   
 0.977
RBM26
RNA binding motif protein 26.
   
 
 0.950
H2ZSK5_LATCH
Uncharacterized protein.
     
 0.948
RBM27
RNA binding motif protein 27.
   
 
 0.938
ALKBH5-2
AlkB homolog 5, RNA demethylase.
      
 0.904
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.896
TRA2A
Transformer 2 alpha homolog.
   
 
 0.881
WTAP
WT1 associated protein.
   
 
 0.864
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.843
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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