Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS1Calpain small subunit 1. (269 aa)    
Predicted Functional Partners:
LOC102356340
Uncharacterized protein.
   
 0.972
LOC102348518
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
 
 
 0.954
H3AP61_LATCH
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
 
 
 0.929
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
   
 0.918
LOC102353252
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
 
 
 0.904
LOC102347065
Uncharacterized protein; Belongs to the peptidase C2 family.
   
 0.902
CAPN1
Calpain 1; Belongs to the peptidase C2 family.
   
 0.902
CAPN6
Calpain 6; Belongs to the peptidase C2 family.
 
 
 0.885
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
  
 0.851
CAPN9
Calpain 9; Belongs to the peptidase C2 family.
   
 0.843
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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