STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBCK1IBR domain-containing protein. (175 aa)    
Predicted Functional Partners:
RNF31
Uncharacterized protein.
   
 0.975
BIRC2
Baculoviral IAP repeat containing 2.
    
 0.952
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
  0.940
LOC102356355
TNFR-Cys domain-containing protein.
    
 0.923
RIPK2
Receptor interacting serine/threonine kinase 2.
    
 0.922
LOC102348796
Uncharacterized protein.
    
 0.922
SPATA2
Spermatogenesis associated 2.
     
  0.908
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 0.814
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.701
UBE2L6
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.698
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.