STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBP7Retinol binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (133 aa)    
Predicted Functional Partners:
PALM2AKAP2
PALM2-AKAP2 fusion.
      
 0.685
APOB
Apolipoprotein B.
   
 
 0.581
FAM110C
Family with sequence similarity 110 member C.
      
 0.578
AKR1B1
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 1.
   
  0.466
AKR1D1
Aldo-keto reductase family 1 member D1.
   
  0.466
LOC102347995
Aldo_ket_red domain-containing protein.
   
  0.466
LOC102365366
Aldo_ket_red domain-containing protein.
   
  0.466
LOC102365063
Apolipoprotein A-IV b, tandem duplicate 2.
   
 
 0.464
VTN
Vitronectin b.
   
  
 0.431
H2ZS43_LATCH
DUF1943 domain-containing protein.
   
 
 0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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