STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM81AFamily with sequence similarity 81 member A. (408 aa)    
Predicted Functional Partners:
MCTP2
Multiple C2 and transmembrane domain containing 2.
      
 0.748
TMC1
Transmembrane channel-like protein.
      
 0.603
H3B842_LATCH
Uncharacterized protein.
      
 0.476
NRROS
Negative regulator of reactive oxygen species.
      
 0.474
TOR2A
Torsin.
      
 0.428
LRATD2
LRAT domain containing 2.
      
 0.420
LUZP2
Leucine zipper protein 2.
      
 0.418
FAM135A
Family with sequence similarity 135 member A.
      
 0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.