STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A7C6_LATCHRT_RNaseH_2 domain-containing protein. (242 aa)    
Predicted Functional Partners:
H3B9Z3_LATCH
Reverse transcriptase domain-containing protein.
 
     0.689
FANCM
FA complementation group M.
    
 0.639
H3A2D1_LATCH
Integrase catalytic domain-containing protein.
 
 
   0.620
H2ZRT1_LATCH
Integrase catalytic domain-containing protein.
 
     0.543
H2ZTL0_LATCH
Integrase catalytic domain-containing protein.
 
     0.540
H3AQB0_LATCH
RT_RNaseH_2 domain-containing protein.
  
     0.519
H3B3V0_LATCH
Reverse transcriptase domain-containing protein.
  
     0.518
H3B6N1_LATCH
Integrase catalytic domain-containing protein.
 
     0.516
H3AA81_LATCH
Integrase catalytic domain-containing protein.
 
 
   0.515
H3ABM2_LATCH
Reverse transcriptase domain-containing protein.
 
     0.512
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.