RNF13 protein (Latimeria chalumnae) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

RNF13

Ring finger protein 13. (381 aa)

Predicted Functional Partners:

SDF2

0.661

OTUB2

0.513

RPS27A

0.509

OTUB1

0.498

CSKMT

0.498

LOC102350907

0.477

KXD1

0.477

HSF2BP

0.424

RNF128

0.420

TMEM183A

0.418

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSKMT	KXD1	ENSLACP00000019604	ENSLACP00000009213	Citrate synthase lysine methyltransferase.	Ubiquitin-like domain-containing protein.	0.604
CSKMT	LOC102350907	ENSLACP00000019604	ENSLACP00000003879	Citrate synthase lysine methyltransferase.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.604
CSKMT	RNF128	ENSLACP00000019604	ENSLACP00000023449	Citrate synthase lysine methyltransferase.	Ring finger protein 128.	0.498
CSKMT	RNF13	ENSLACP00000019604	ENSLACP00000005552	Citrate synthase lysine methyltransferase.	Ring finger protein 13.	0.498
CSKMT	RPS27A	ENSLACP00000019604	ENSLACP00000008678	Citrate synthase lysine methyltransferase.	Ribosomal protein S27a.	0.580
HSF2BP	RNF13	ENSLACP00000006144	ENSLACP00000005552	Heat shock transcription factor 2 binding protein.	Ring finger protein 13.	0.424
HSF2BP	TMEM183A	ENSLACP00000006144	ENSLACP00000020578	Heat shock transcription factor 2 binding protein.	Transmembrane protein 183A.	0.578
KXD1	CSKMT	ENSLACP00000009213	ENSLACP00000019604	Ubiquitin-like domain-containing protein.	Citrate synthase lysine methyltransferase.	0.604
KXD1	OTUB1	ENSLACP00000009213	ENSLACP00000011836	Ubiquitin-like domain-containing protein.	Ubiquitin thioesterase.	0.715
KXD1	OTUB2	ENSLACP00000009213	ENSLACP00000006653	Ubiquitin-like domain-containing protein.	Ubiquitin thioesterase.	0.715
KXD1	RNF13	ENSLACP00000009213	ENSLACP00000005552	Ubiquitin-like domain-containing protein.	Ring finger protein 13.	0.477
KXD1	RPS27A	ENSLACP00000009213	ENSLACP00000008678	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.999
LOC102350907	CSKMT	ENSLACP00000003879	ENSLACP00000019604	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Citrate synthase lysine methyltransferase.	0.604
LOC102350907	OTUB1	ENSLACP00000003879	ENSLACP00000011836	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin thioesterase.	0.715
LOC102350907	OTUB2	ENSLACP00000003879	ENSLACP00000006653	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin thioesterase.	0.715
LOC102350907	RNF13	ENSLACP00000003879	ENSLACP00000005552	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ring finger protein 13.	0.477
LOC102350907	RPS27A	ENSLACP00000003879	ENSLACP00000008678	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.994
OTUB1	KXD1	ENSLACP00000011836	ENSLACP00000009213	Ubiquitin thioesterase.	Ubiquitin-like domain-containing protein.	0.715
OTUB1	LOC102350907	ENSLACP00000011836	ENSLACP00000003879	Ubiquitin thioesterase.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.715
OTUB1	RNF128	ENSLACP00000011836	ENSLACP00000023449	Ubiquitin thioesterase.	Ring finger protein 128.	0.951