STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHPT1Phosphohistidine phosphatase 1. (120 aa)    
Predicted Functional Partners:
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
    0.693
ND2
NADH-ubiquinone oxidoreductase chain 2; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
      
 0.597
NDUFS7
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
   
    0.588
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.578
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
   
    0.544
CLPP
ATP-dependent Clp protease proteolytic subunit.
   
    0.534
NDUFA7
NADH:ubiquinone oxidoreductase subunit A7.
   
    0.533
LOC102354581
Uncharacterized protein.
   
    0.527
MRPL41
Mitochondrial ribosomal protein L41.
   
  
 0.490
TMEM147
Transmembrane protein 147.
   
    0.481
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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