STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMIPUncharacterized protein. (647 aa)    
Predicted Functional Partners:
CMIP-2
Uncharacterized protein.
 
      0.900
CDC42EP4
CDC42 effector protein 4.
      
 0.641
HIVEP2
Human immunodeficiency virus type I enhancer binding protein 2.
      
 0.555
SORCS2
Sortilin related VPS10 domain containing receptor 2.
      
 0.549
ARHGAP32-2
Uncharacterized protein.
      
 0.510
ARHGAP32
Rho GTPase activating protein 32.
      
 0.508
ATP2C1
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.483
FLNA
Filamin A.
    
 
 0.447
SMURF1
SMAD specific E3 ubiquitin protein ligase 1.
      
 0.435
ITGB4
Integrin beta.
      
 0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.