Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102360922Flavin-containing monooxygenase. (1064 aa)    
Predicted Functional Partners:
LOC102358421
Uncharacterized protein.
   
 0.907
GAD1
Glutamate decarboxylase 1.
   
 0.907
CSAD
Uncharacterized protein.
   
 0.907
GADL1
Glutamate decarboxylase like 1.
   
 0.907
GGT7
Gamma-glutamyltransferase 7.
  
 
 0.905
GGT5
Gamma-glutamyltransferase 5a.
  
 
 0.904
LOC102347571
Uncharacterized protein.
  
 
 0.904
H2ZV64_LATCH
Uncharacterized protein.
     
 0.901
LOC102363365
Uncharacterized protein.
     
 0.901
BAAT
Uncharacterized protein.
     
 0.901
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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