STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASD1CAS1 domain containing 1. (800 aa)    
Predicted Functional Partners:
SIAE
Sialic acid acetylesterase.
      
 0.699
ST8SIA1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
      
 0.553
NEU4
Neuraminidase 4.
      
 0.537
LOC102366592
Cytidine monophospho-N-acetylneuraminic acid hydroxylase.
      
 0.473
ST3GAL5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
      
 0.455
ST6GALNAC6
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.442
SLC35B2
Solute carrier family 35 member B2.
      
 0.424
ASB4
Ankyrin repeat and SOCS box containing 4.
      
 0.420
ACP7
Purple acid phosphatase.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.