STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1CGRAM domain containing 1C. (564 aa)    
Predicted Functional Partners:
GTPBP8
GTP binding protein 8 (putative).
      
 0.685
SPICE1
Spindle and centriole associated protein 1.
      
 0.552
MPZL2
Myelin protein zero like 2.
    
 0.533
SCN2B
Sodium voltage-gated channel beta subunit 2.
    
 0.533
GRAMD2B
GRAM domain containing 2B.
    
 
0.519
TRIAP1
TP53 regulated inhibitor of apoptosis 1.
      
 0.477
C12orf66
Chromosome 12 open reading frame 66.
      
 0.476
H3B365_LATCH
Uncharacterized protein.
      
 0.461
TTC37
Tetratricopeptide repeat domain 37.
      
 0.457
UBE2Q2
Ubiquitin conjugating enzyme E2 Q2.
   
    0.446
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.