Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TATDN3TatD DNase domain containing 3. (255 aa)    
Predicted Functional Partners:
SKAP2
Src kinase associated phosphoprotein 2.
      
 0.867
BEND7
BEN domain-containing protein.
      
 0.802
RPS6KC1
Ribosomal protein S6 kinase C1.
      
 0.802
ANGEL1
Angel homolog 1.
      
 0.793
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.791
EIF1AD
Eukaryotic translation initiation factor 1A domain containing.
      
 0.709
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
  
 0.708
APLF
FHA_2 domain-containing protein.
   
  
 0.674
TATDN1
TatD DNase domain containing 1.
      
 0.652
PHYH
Phytanoyl-CoA 2-hydroxylase.
      
 0.641
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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