STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HS3ST1Sulfotransferase; Belongs to the sulfotransferase 1 family. (314 aa)    
Predicted Functional Partners:
H3ATF6_LATCH
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
  
 
0.902
LOC102352685
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
  
 
0.901
RAB28
Uncharacterized protein.
      
 0.703
TNS4
Tensin 4.
      
 0.657
KCNK1
Potassium channel subfamily K member.
      
 0.656
ZMAT4
Zinc finger matrin-type 4.
      
 0.648
PSD2
Pleckstrin and Sec7 domain containing 2.
      
 0.643
CNTN1
Contactin 1.
   
 
 0.597
CDH20
Cadherin 20; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.580
PTPN13
Tyrosine-protein phosphatase non-receptor type 13; Regulates negatively FAS-induced apoptosis and NGFR-mediated pro-apoptotic signaling.
      
 0.573
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.