Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LYRM1LYR motif containing 1; Belongs to the complex I LYR family. (121 aa)    
Predicted Functional Partners:
ETFRF1
Electron transfer flavoprotein regulatory factor 1; Belongs to the complex I LYR family.
      
 0.919
B9D1
B9 domain containing 1.
    
 0.811
SDHAF3
Succinate dehydrogenase complex assembly factor 3.
      
 0.790
LYRM9
LYR motif containing 9; Belongs to the complex I LYR family.
      
 0.789
B9D2
B9 domain containing 2.
    
 0.769
LOC102366825
Tr-type G domain-containing protein.
    
 0.739
EEF2
Eukaryotic translation elongation factor 2, like 2.
    
 0.739
H3A0S5_LATCH
Uncharacterized protein.
    
 0.687
MKS1
MKS transition zone complex subunit 1.
    
 0.681
KIN
Kin17 DNA and RNA binding protein.
    
 0.679
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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