Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3A7M4_LATCHPhosphodiesterase. (663 aa)    
Predicted Functional Partners:
PDE6G
Phosphodiesterase 6G.
   
 0.936
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
   
 0.611
H3ALJ8_LATCH
PDEase domain-containing protein.
 
      0.574
CNGB1
Cyclic nucleotide gated channel subunit beta 1.
   
 0.550
GUCY2C
Guanylate cyclase.
   
 0.545
CCDC13
Coiled-coil domain containing 13.
      
 0.542
REEP6
Receptor expression-enhancing protein.
      
 0.525
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
      
 0.522
CNGA3
Cyclic nucleotide gated channel subunit alpha 3.
   
 0.520
H2ZZF8_LATCH
Recoverin 3.
   
  
 0.514
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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