Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM183AFamily with sequence similarity 183 member A. (141 aa)    
Predicted Functional Partners:
CFAP126
Cilia and flagella associated protein 126.
   
 
 0.987
C11orf1
Chromosome 11 open reading frame 1.
    
 
 0.975
LOC102360155
Uncharacterized protein.
   
 
 0.974
CFAP77
Cilia and flagella associated protein 77.
    
 
 0.965
H3B708_LATCH
Uncharacterized protein.
    
 
 0.961
TEKT2
Tektin 2.
   
 
 0.940
C9orf135
Chromosome 9 open reading frame 135.
   
   0.921
LOC102354290
Uncharacterized protein.
   
 
 0.920
WDR90
WD repeat domain 90.
    
   0.919
C9orf116
Chromosome 9 open reading frame 116.
   
   0.917
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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