LRRC10 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LRRC10

Uncharacterized protein. (244 aa)

Predicted Functional Partners:

LOC102362853

0.749

LOC102364878

0.732

CDC42EP3

0.654

GLIPR1

0.591

SCN4A

0.548

LOC102359959

0.546

LOC102360231

0.546

LOC102360492

0.546

LRRTM4

0.534

LRRTM3

0.534

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42EP3	LOC102359959	ENSLACP00000016357	ENSLACP00000015337	CDC42 effector protein 3.	ZnMc domain-containing protein.	0.521
CDC42EP3	LOC102360231	ENSLACP00000016357	ENSLACP00000015443	CDC42 effector protein 3.	ZnMc domain-containing protein.	0.521
CDC42EP3	LOC102360492	ENSLACP00000016357	ENSLACP00000016009	CDC42 effector protein 3.	ZnMc domain-containing protein.	0.521
CDC42EP3	LOC102362853	ENSLACP00000016357	ENSLACP00000010409	CDC42 effector protein 3.	Si:ch73-362m14.4.	0.708
CDC42EP3	LOC102364878	ENSLACP00000016357	ENSLACP00000017619	CDC42 effector protein 3.	PRKG1_interact domain-containing protein.	0.722
CDC42EP3	LRRC10	ENSLACP00000016357	ENSLACP00000005680	CDC42 effector protein 3.	Uncharacterized protein.	0.654
GLIPR1	LRRC10	ENSLACP00000023367	ENSLACP00000005680	GLI pathogenesis related 1; Belongs to the CRISP family.	Uncharacterized protein.	0.591
LOC102359959	CDC42EP3	ENSLACP00000015337	ENSLACP00000016357	ZnMc domain-containing protein.	CDC42 effector protein 3.	0.521
LOC102359959	LOC102360492	ENSLACP00000015337	ENSLACP00000016009	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.632
LOC102359959	LOC102362853	ENSLACP00000015337	ENSLACP00000010409	ZnMc domain-containing protein.	Si:ch73-362m14.4.	0.659
LOC102359959	LOC102364878	ENSLACP00000015337	ENSLACP00000017619	ZnMc domain-containing protein.	PRKG1_interact domain-containing protein.	0.659
LOC102359959	LRRC10	ENSLACP00000015337	ENSLACP00000005680	ZnMc domain-containing protein.	Uncharacterized protein.	0.546
LOC102360231	CDC42EP3	ENSLACP00000015443	ENSLACP00000016357	ZnMc domain-containing protein.	CDC42 effector protein 3.	0.521
LOC102360231	LOC102360492	ENSLACP00000015443	ENSLACP00000016009	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.632
LOC102360231	LOC102362853	ENSLACP00000015443	ENSLACP00000010409	ZnMc domain-containing protein.	Si:ch73-362m14.4.	0.659
LOC102360231	LOC102364878	ENSLACP00000015443	ENSLACP00000017619	ZnMc domain-containing protein.	PRKG1_interact domain-containing protein.	0.659
LOC102360231	LRRC10	ENSLACP00000015443	ENSLACP00000005680	ZnMc domain-containing protein.	Uncharacterized protein.	0.546
LOC102360492	CDC42EP3	ENSLACP00000016009	ENSLACP00000016357	ZnMc domain-containing protein.	CDC42 effector protein 3.	0.521
LOC102360492	LOC102359959	ENSLACP00000016009	ENSLACP00000015337	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.632
LOC102360492	LOC102360231	ENSLACP00000016009	ENSLACP00000015443	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.632