STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102361286Calmodulin 2; Belongs to the calmodulin family. (149 aa)    
Predicted Functional Partners:
LOC102360076
Protein kinase domain-containing protein.
   
 0.985
PPP3CC
Serine/threonine-protein phosphatase.
    
 0.974
PPP3CA
Serine/threonine-protein phosphatase.
 
  
 0.973
CNGB1
Cyclic nucleotide gated channel subunit beta 1.
   
 0.963
PHKG1
Phosphorylase kinase catalytic subunit gamma 1; Belongs to the protein kinase superfamily.
    
 0.959
PHKG2
Phosphorylase kinase catalytic subunit gamma 2; Belongs to the protein kinase superfamily.
    
 0.959
NOS1
Nitric oxide synthase 1.
    
 0.950
NOS2
Nitric oxide synthase; Produces nitric oxide (NO).
    
 0.950
PDE1C
Phosphodiesterase.
    
 0.946
PDE1A
Phosphodiesterase.
    
 0.946
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.