Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYPLAL1Lysophospholipase like 1. (232 aa)    
Predicted Functional Partners:
SLC30A8
Uncharacterized protein.
      
 0.821
CHAF1B
Chromatin assembly factor 1 subunit B.
    
 
 0.712
MB
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
    
   0.685
ABHD13
Abhydrolase domain containing 13.
     
 0.684
ABHD17C
Abhydrolase domain containing 17C.
     
 0.657
ABHD17B
Abhydrolase domain containing 17B.
     
 0.657
ABHD17A
Abhydrolase domain containing 17A.
     
 0.657
ZDHHC23
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.644
VSIG10
Uncharacterized protein.
      
 0.641
TTC17
Tetratricopeptide repeat domain 17.
      
 0.639
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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