STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A7X3_LATCHIg-like domain-containing protein. (232 aa)    
Predicted Functional Partners:
REL
REL proto-oncogene, NF-kB subunit.
   
 0.736
H3B111_LATCH
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.736
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.730
H3B6K7_LATCH
IKKbetaNEMObind domain-containing protein.
   
 0.730
TGFB1
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.714
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.611
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
   
 0.606
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.599
RPS27A
Ribosomal protein S27a.
    
  0.591
RBX1
Ring-box 1.
   
  0.534
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.