Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
H3A7Y4_LATCHMatrin-type domain-containing protein. (153 aa)    
Predicted Functional Partners:
TM2D2
TM2 domain containing 2.
      
 0.600
PLEKHA2
Pleckstrin homology domain containing A2.
      
 0.582
RAB11FIP1
RAB11 family interacting protein 1.
      
 0.517
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
   
  
 0.508
DENND5B
DENN domain containing 5B.
   
  
 0.472
DENND5A
DENN domain containing 5A.
   
  
 0.472
LENG9
Leukocyte receptor cluster member 9.
      
 0.468
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.467
GREB1
Uncharacterized protein.
      
 0.453
PRKRA
Protein activator of interferon induced protein kinase EIF2AK2.
    
 
 0.440
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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