Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NUS1NUS1 dehydrodolichyl diphosphate synthase subunit. (276 aa)    
Predicted Functional Partners:
DHDDS
Alkyl transferase; Belongs to the UPP synthase family.
   
 0.999
GGPS1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
  
 
 0.944
PDSS1
Decaprenyl diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
  
 
 0.942
PDSS2
Decaprenyl diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
  
 
 0.942
RUSC1
RUN and SH3 domain containing 1.
  
 
 0.942
TMEM183A
Transmembrane protein 183A.
   
  
 0.930
FNTA
Farnesyltransferase, CAAX box, alpha.
     
 0.924
LOC102350945
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.916
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
   
 
 0.831
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.802
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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