STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGR2Anterior gradient 2, protein disulphide isomerase family member. (173 aa)    
Predicted Functional Partners:
TCF25
Transcription factor 25.
      
 0.704
SPDEF
SAM pointed domain containing ETS transcription factor.
   
  
 0.613
EPS8L3
EPS8 like 3.
   
  
 0.603
SLC44A4
Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family.
   
  
 0.596
PIK3IP1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.539
CKMT1A
Creatine kinase, mitochondrial 1; Belongs to the ATP:guanido phosphotransferase family.
      
 0.503
SEPTIN9
Septin 9; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 
 0.501
EME2
Essential meiotic structure-specific endonuclease subunit 2.
   
  
 0.501
CLCA4
Chloride channel accessory 1.
   
  
 0.434
H3A3F8_LATCH
Uncharacterized protein.
   
  
 0.434
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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