STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRIP1Nuclear receptor interacting protein 1. (1186 aa)    
Predicted Functional Partners:
ESR2
Estrogen receptor 2.
    
 0.940
LOC102352539
Uncharacterized protein.
   
 
 0.909
GATA3
GATA binding protein 3.
     
 0.872
THRA
Thyroid hormone receptor alpha.
    
 0.780
PPARGC1A
PPARG coactivator 1 alpha.
    
 0.770
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.715
PGR
Progesterone receptor.
    
 0.709
RORA
RAR related orphan receptor A.
    
 0.698
RORC
RAR related orphan receptor C.
    
 0.698
CREBBP
CREB binding protein.
   
 
 0.689
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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