STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD3P4Hc domain-containing protein. (758 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
  
0.702
MUSK
Muscle associated receptor tyrosine kinase.
      
 0.572
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
   
0.559
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
   
0.559
CERCAM
Cerebral endothelial cell adhesion molecule.
   
0.559
COL17A1
Collagen type XVII alpha 1 chain.
   
 0.546
H3ATS1_LATCH
Uncharacterized protein.
    
 0.535
COL8A1
Collagen type VIII alpha 1 chain.
   
 0.532
COL6A2
Collagen type VI alpha 2 chain.
   
  0.511
MOSMO
Modulator of smoothened.
   
 0.459
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.