Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
RAVER2Ribonucleoprotein, PTB binding 2. (748 aa)    
Predicted Functional Partners:
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
 
 0.663
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.630
PTBP3
Polypyrimidine tract binding protein 3.
   
 0.630
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.619
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
    
 0.613
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.601
HNRNPC
RRM domain-containing protein.
    
 0.563
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.526
KANK4
KN motif and ankyrin repeat domains 4.
      
 0.467
PRPF4B
Pre-mRNA processing factor 4B.
   
  
 0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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