STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS18L1SS18L1 subunit of BAF chromatin remodeling complex. (409 aa)    
Predicted Functional Partners:
BCL7C
Uncharacterized protein.
    
 
 0.946
BCL7A
BAF chromatin remodeling complex subunit BCL7A.
    
 
 0.874
BCL7B
BAF chromatin remodeling complex subunit BCL7B.
    
 
 0.841
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 
 0.811
BRD9
Bromodomain containing 9.
   
 
 0.774
ARID1B
AT-rich interaction domain 1B.
    
 
 0.657
PHF10
PHD finger protein 10.
    
 
 0.644
DPF2
Double PHD fingers 2.
    
 
 0.643
BRD7
Bromodomain containing 7.
   
 
 0.618
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.617
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.