Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IKIK cytokine. (571 aa)    
Predicted Functional Partners:
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 0.995
MFAP1
Microfibril associated protein 1.
   
 0.979
XAB2
XPA binding protein 2.
   
  0.955
SNIP1
Smad nuclear interacting protein 1.
    
   0.954
ZNF830
zf-C2H2_jaz domain-containing protein.
    
  0.952
RNF113A
Ring finger protein 113A.
    
  0.952
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.947
FRA10AC1
FRA10A associated CGG repeat 1.
   
   0.932
WDR55
WD repeat domain 55.
 
      0.898
TCERG1
Transcription elongation regulator 1.
   
  0.897
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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