Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A898_LATCHIg-like domain-containing protein. (156 aa)    
Predicted Functional Partners:
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 0.611
ASF1A
Anti-silencing function 1A histone chaperone.
   
  
 0.604
RELN
Reelin.
      
 0.591
LINGO2
Leucine rich repeat and Ig domain containing 2.
   
 0.567
IGLON5
IgLON family member 5.
   
 
 0.547
TLK2
Tousled like kinase 2.
   
  
 0.517
SLITRK1
SLIT and NTRK like family member 1.
   
 0.478
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
   
 0.448
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 
 0.448
NTNG1
Netrin G1.
    
 0.443
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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