STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSCGoosecoid homeobox. (243 aa)    
Predicted Functional Partners:
WDR26
WD_REPEATS_REGION domain-containing protein.
    
   0.923
SUPT6H
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
    
   0.923
LOC102356421
ISY1 splicing factor homolog.
    
   0.923
RRP15
Ribosomal RNA processing 15 homolog.
    
   0.923
ZNF330
Zinc finger protein 330.
    
   0.923
LOC102345998
MOB family member 4, phocein.
    
   0.923
TARDBP
TAR DNA binding protein.
    
   0.923
TEKT2
Tektin 2.
    
   0.923
TBX20
T-box transcription factor 20.
    
   0.868
RAB11FIP4
RAB11 family interacting protein 4.
    
   0.848
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.