STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEFF1Transmembrane protein with EGF-like and two follistatin-like domains 1a. (321 aa)    
Predicted Functional Partners:
SLC16A4
Solute carrier family 16 member 4.
      
 0.579
MMP28
Matrix metallopeptidase 28.
      
 0.576
LOC102354490
Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.
      
 0.546
C1QL2
Complement C1q like 2.
      
 0.540
PEX5L
Peroxisomal biogenesis factor 5 like.
      
 0.515
APLNR
Apelin receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.512
CD74
CD74 molecule.
      
 0.461
MAD2L2
Mitotic arrest deficient 2 like 2.
    
   0.441
GDF3
Growth differentiation factor 3.
    
 0.415
LOC102348280
Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.412
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.