STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPG5Ectopic P-granules autophagy protein 5 homolog (C. elegans). (1395 aa)    
Predicted Functional Partners:
H3AFQ9_LATCH
Uncharacterized protein.
 
     0.950
ATG2B
Autophagy related 2B.
   
  
 0.794
TECPR2
Tectonin beta-propeller repeat containing 2.
   
  
 0.736
ATG13
Autophagy related 13.
      
 0.697
WIPI2
WD repeat domain, phosphoinositide interacting 2.
      
 0.671
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.660
ATG4B
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
      
 0.643
ULK2
Unc-51 like autophagy activating kinase 2.
      
 0.629
BECN1
Beclin 1, autophagy related.
      
 0.542
SNAP29
Synaptosome associated protein 29.
      
 0.479
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.