Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BEND4BEN domain containing 4. (538 aa)    
Predicted Functional Partners:
SLC30A9
Solute carrier family 30 member 9.
      
 0.921
TMEM33
Transmembrane protein 33.
      
 0.792
BEND7
BEN domain-containing protein.
      
 0.598
BEND5
BEN domain containing 5.
      
 0.591
BEND3
BEN domain containing 3.
      
 0.587
NFXL1
Nuclear transcription factor, X-box binding like 1.
      
 0.565
HTATSF1
HIV-1 Tat specific factor 1.
      
 0.556
PYURF
Uncharacterized protein.
      
 0.504
BANP
BTG3 associated nuclear protein.
      
 0.504
SUSD2
Sushi domain containing 2.
      
 0.488
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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