STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR1E5-hydroxytryptamine receptor 1E. (365 aa)    
Predicted Functional Partners:
HTR3B
5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.754
HTR3A
5-hydroxytryptamine (serotonin) receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.730
HTR5A
5-hydroxytryptamine receptor 5A.
   
 
0.610
GNB4
G protein subunit beta 4.
    
 0.581
GNB1
G protein subunit beta 1.
    
 0.581
H3B6L2_LATCH
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 
0.560
GNG2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.539
GBE1
1,4-alpha-glucan branching enzyme 1.
      
 0.489
GNAI1
G protein subunit alpha i1.
    
  0.487
LOC102361424
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.
    
  0.487
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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