STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U2AF1U2 small nuclear RNA auxiliary factor 1. (192 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.999
SRSF2
Serine and arginine rich splicing factor 2a.
   
 0.984
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.977
SRSF1
Serine and arginine rich splicing factor 1a.
   
 0.958
CDC40
Cell division cycle 40.
     
 0.956
SLU7
SLU7 homolog, splicing factor.
     
 0.955
DHX38
DEAH-box helicase 38.
    
 0.955
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.821
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.802
SF1
Splicing factor 1.
 
 
 
 0.783
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.