STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAPAVAMP associated protein A. (244 aa)    
Predicted Functional Partners:
OSBP
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.936
STARD3
StAR related lipid transfer domain containing 3.
    
 
 0.930
LOC102350608
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.854
VAMP8
Vesicle associated membrane protein 8.
   
 0.831
OSBPL1A
Oxysterol-binding protein; Belongs to the OSBP family.
    
 
 0.820
CERT1
Ceramide transporter 1.
    
 0.785
VAPB
VAMP associated protein B and C.
  
0.783
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
 0.738
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent 1L.
    
 0.735
STARD3NL
STARD3 N-terminal like.
    
 
 0.734
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.