STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSCAMDS cell adhesion molecule. (1707 aa)    
Predicted Functional Partners:
DSCAML1
Uncharacterized protein.
 
    
 0.973
H3B0D6_LATCH
Uncharacterized protein.
 
      0.900
LOC102356949
Netrin 2.
   
 0.622
LOC102346244
Uncharacterized protein.
   
 0.622
NTN1
Netrin 1.
   
 0.621
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.477
UNC5A
Unc-5 netrin receptor A.
      
 0.465
KCND1
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
   
 
 0.450
TENM2
Uncharacterized protein.
   
 
 0.449
H3AGE3_LATCH
Uncharacterized protein.
   
 0.448
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.