STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO5AMyosin VA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1892 aa)    
Predicted Functional Partners:
RAB27A
RAB27A, member RAS oncogene family.
    
 0.802
LOC102357106
RAB11a, member RAS oncogene family, like.
   
 0.707
RAB11A
RAB11A, member RAS oncogene family.
   
 0.707
LOC102363089
RAB11B, member RAS oncogene family, b.
   
 0.707
RAB11B
RAB11B, member RAS oncogene family.
   
 0.707
RAB11FIP2
RAB11 family interacting protein 2.
   
 0.696
RAB11FIP1
RAB11 family interacting protein 1.
   
 0.653
EXOC4
Exocyst complex component 4.
    
 0.635
MLPH
Melanophilin.
    
 
 0.582
LOC102361286
Calmodulin 2; Belongs to the calmodulin family.
    
 0.576
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.