STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINE3Serpin family E member 3; Belongs to the serpin family. (417 aa)    
Predicted Functional Partners:
HABP2
Hyaluronan binding protein 2.
   
 0.801
H3A2J8_LATCH
Uncharacterized protein.
   
 0.801
PDCD10
Programmed cell death 10.
 
 
  
 0.662
PLAT
Plasminogen activator; Belongs to the peptidase S1 family.
    
 0.647
H2ZVR1_LATCH
Uncharacterized protein.
   
 0.617
MST1
Macrophage stimulating 1; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.610
LOC102365046
SERPIN domain-containing protein; Belongs to the serpin family.
 
     0.536
CCDC157
Coiled-coil domain containing 157.
   
    0.530
PLAU
Uncharacterized protein.
    
 0.490
PLG
Plasminogen; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.482
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.