Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADNP2ADNP homeobox 2. (1116 aa)    
Predicted Functional Partners:
CBX3
Chromobox 3.
    
 
 0.963
ATXN2L
Ataxin 2 like.
      
 0.829
RRP36
Ribosomal RNA processing 36.
      
 0.814
CBX1
Chromobox 1.
    
 
 0.792
CBX5
Chromobox 5.
    
 
 0.792
MPHOSPH8
M-phase phosphoprotein 8.
    
 
 0.707
IST1
IST1 factor associated with ESCRT-III.
      
 0.685
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
      
 0.682
CAPNS1
Calpain small subunit 1.
      
 0.641
DARS1
Aspartyl-tRNA synthetase.
   
  
 0.641
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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