Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (309 aa)    
Predicted Functional Partners:
HNRNPC
RRM domain-containing protein.
   
 0.966
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.965
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
  0.947
YBX1
Y-box binding protein 1.
   
 0.939
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.927
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.917
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.912
HNRNPH1
Uncharacterized protein.
   
 0.911
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.891
HSPB1
Heat shock protein family B (small) member 1; Belongs to the small heat shock protein (HSP20) family.
   
 0.880
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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