STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBPCCHC-type zinc finger, nucleic acid binding protein b. (163 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
  
 0.860
LOC102352872
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.666
LOC102362329
Prolactin releasing hormone receptor 2b.
      
 0.666
LOC102353347
Prolactin releasing hormone 2 receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.666
SERBP1
SERPINE1 mRNA binding protein 1.
   
 
 0.624
MRM2
Mitochondrial rRNA methyltransferase 2.
   
 
 0.614
DNAJC30
DnaJ heat shock protein family (Hsp40) member C30.
    
 
 0.559
CISD3
Uncharacterized protein.
      
 0.557
SUFU
SUFU negative regulator of hedgehog signaling.
      
 0.552
OAZ1
Uncharacterized protein.
   
    0.529
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.