STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN15Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (235 aa)    
Predicted Functional Partners:
PEX19
Peroxisomal biogenesis factor 19.
    
 0.973
PEX3
Peroxisomal biogenesis factor 3.
     
 0.970
PEX13
SH3 domain-containing protein.
     
 0.944
PEX14
Peroxisomal biogenesis factor 14.
     
 0.939
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.894
GDAP1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
    
 0.870
PEX16
Peroxisomal membrane protein PEX16.
     
 0.846
PEX11B
Peroxisomal biogenesis factor 11 beta.
    
 0.841
PEX11A
Peroxisomal biogenesis factor 11 alpha.
    
 0.841
ACBD5
Acyl-CoA binding domain containing 5.
   
 
 0.772
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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