Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UPK1ATetraspanin. (259 aa)    
Predicted Functional Partners:
H3BGP8_LATCH
Uncharacterized protein.
  
  
 0.887
TSPAN31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
      
 0.704
CD151
Tetraspanin.
      
 0.660
RBP5
Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.643
CD63
Tetraspanin.
      
 0.588
CD81
Tetraspanin.
      
 0.577
CD53
Tetraspanin.
      
 0.575
REL
REL proto-oncogene, NF-kB subunit.
     
 0.565
CD37
Tetraspanin.
      
 0.541
MPLKIP
M-phase specific PLK1 interacting protein.
  
   
 0.506
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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