Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A8Q7_LATCHUncharacterized protein. (1603 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
   
  0.526
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.461
CFAP43
Cilia and flagella associated protein 43.
    
 
 0.456
LOC102345465
Uncharacterized protein.
   
 0.451
H3AN32_LATCH
Uncharacterized protein.
   
 0.451
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.449
EFHB
EF-hand domain family member B.
   
   0.447
CCDC65
Coiled-coil domain containing 65.
   
   0.441
CCDC113
Coiled-coil domain containing 113.
    
   0.438
ZMYND12
Zinc finger MYND-type containing 12.
    
   0.438
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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