Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102345150LRRNT domain-containing protein. (344 aa)    
Predicted Functional Partners:
LRRC10B
Leucine rich repeat containing 10B.
  
     0.531
H3AKF0_LATCH
Pannexin_like domain-containing protein.
  
     0.530
LRRC2
Leucine rich repeat containing 2.
  
     0.529
LRRC10
Uncharacterized protein.
  
     0.526
LRR1
Leucine rich repeat protein 1.
  
   
 0.526
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
  
     0.522
RSU1
Ras suppressor protein 1.
  
     0.520
LRRC18
Leucine rich repeat containing 18.
  
     0.519
LRRC57
Leucine rich repeat containing 57.
  
     0.519
LRRC58
Leucine rich repeat containing 58.
  
     0.496
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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