Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
USP20Ubiquitin carboxyl-terminal hydrolase. (902 aa)    
Predicted Functional Partners:
TOR1B
Torsin.
      
 0.822
C9orf78
Chromosome 9 open reading frame 78.
    
 
 0.753
FNBP1
Formin binding protein 1.
      
 0.734
ADRB2
Adrenoceptor beta 2.
    
 0.686
ADRB1
Adrenoceptor beta 1.
    
 0.686
PRRX2
Paired related homeobox 2.
      
 0.660
CCP110
Centriolar coiled-coil protein 110.
    
 0.631
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.629
USP14
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.618
VAPB
VAMP associated protein B and C.
   
 
 0.599
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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