STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3A8S3_LATCHUncharacterized protein. (424 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.639
H2ZRT1_LATCH
Integrase catalytic domain-containing protein.
 
     0.633
H3AH72_LATCH
Integrase catalytic domain-containing protein.
 
     0.627
H3A2D1_LATCH
Integrase catalytic domain-containing protein.
 
 
   0.555
H3AA81_LATCH
Integrase catalytic domain-containing protein.
 
 
   0.549
H3B6N1_LATCH
Integrase catalytic domain-containing protein.
 
     0.542
H2ZTA9_LATCH
Integrase catalytic domain-containing protein.
 
     0.527
H3AIQ2_LATCH
Uncharacterized protein.
  
     0.519
H2ZTY8_LATCH
Integrase catalytic domain-containing protein.
 
     0.514
H3AQB0_LATCH
RT_RNaseH_2 domain-containing protein.
  
     0.491
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.