STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN1Ataxin 1. (791 aa)    
Predicted Functional Partners:
CIC
Capicua transcriptional repressor.
    
 
 0.955
ATXN1L
Ataxin 1 like.
    
0.928
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.922
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.914
UBQLN4
Ubiquilin 4.
    
 
 0.852
PQBP1
Polyglutamine binding protein 1.
    
 
 0.785
HTT
Huntingtin.
      
 0.771
ATXN2
Ataxin 2.
   
 
 0.714
RBM17
RNA binding motif protein 17.
    
 
 0.710
PIM3
Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily.
      
 0.674
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.